hi ELB,
f i were to be putting a perimeter line in the front section, i would set up 2 nylon web straps slightly forward of hatch. i would run a bungee between the two straps (to complement the bungees in front of the cockpit/allow for holding a paddle on the deck) and a perimeter line from the straps forward to through the hole drilled into the bow for the toggle line and back with a rope loop on the deck to allow you to tension it.
an example is below....the difference is you would not extend the perimeter line back from the forward section....you can do the same thing on the back.

you could adapt this further by puting hooks in the line or otherwise tie it after assembly if you wanted a complete perimeter line. another example that could be adapted is below:

you can use blue tape to model your lines before you make any final decision. i find this a good practice...a picture of what i mean is below:

on your question about toggles, i can't honestly speak from experience doing a lot of rescue practice on my boats. when i do practice rescues, i am usually using a plastic (polyethelene) boat i have. but based on how that boat is set up and how my other boats are set up, i would not worry about the toggles. the toggles are relatively low profile compared to other arrangements like straps. the other thing i would note is that the toggle system is very secure and that has a lot of value. strapped hatches are very challenging to keep from leaking becuase it is very difficult to get enough down pressure without building some structure that itself will cause you to get hung up on a re-entry. you can get hung up on straps (i have) and if the strap is also holding your hatch down, that can be a really bad combination. i am curious what others have to say on the matter.
fwiw...and i am really interested to hear from other kayakers on the questions of rescue practice. i consider my CLC builds, while great kayaks, not the kind of boat that i really like to bang around....and some kinds of rescue practice (re-entries and team rescues) i associate with a lot of banging around...so i usually swap to my plastic dagger for that practice.
on my boats, i practice roles and less dramatic rescues (like exiting) but have not subjected them to a lot of wet re-entry practice (maybe not a good idea...just being honest here). if you do want to get agressive in that kind of practice, i would consider reinforcing the back deck with some extra internal and external glass. don't get me wrong, these boats are plenty strong, but like any high end composite kayak, they don't take well to certain point loads that can sometimes happen during practice rescues if they are not reinforced to handle that....and i think i would strengthen the layup in certain areas (aft deck mainly) if i was going to get aggressive in using the boat that way.
the other thing, and again, i am really interested in other perspectives here, is that a sectional would, in my view, be relatively weak compared to the equivelent non-sectional against certain types of loads that could be experienced with aggressive rescues....so that factors a bit in my thinking. again, nothing that could not be addresses with some extra attention/ glass .....but is something i would think about.
i think you are asking great questions and am interested to hear other and maybe even CLC perspective on your question and or my thoughts.
h